Entry - *602879 - ERYTHROCYTE MEMBRANE PROTEIN BAND 4.1-LIKE 1; EPB41L1 - OMIM
 
* 602879

ERYTHROCYTE MEMBRANE PROTEIN BAND 4.1-LIKE 1; EPB41L1


Alternative titles; symbols

NONERYTHROID PROTEIN 4.1, NEURON TYPE; 4.1N


HGNC Approved Gene Symbol: EPB41L1

Cytogenetic location: 20q11.23     Genomic coordinates (GRCh38): 20:36,091,414-36,232,799 (from NCBI)


Gene-Phenotype Relationships
Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
20q11.23 ?Intellectual developmental disorder, autosomal dominant 11 614257 AD 3

TEXT

Cloning and Expression

Erythrocyte membrane protein band 4.1 (EPB41; 130500) is a multifunctional protein that mediates interactions between the erythrocyte cytoskeleton and the overlying plasma membrane. By screening human brain cDNAs for the potential to encode proteins larger than 100 kD, Nagase et al. (1997) identified a partial EPB41L1 cDNA. The 6,263-bp cDNA contains an open reading frame encoding 934 amino acids; it may lack 5-prime coding sequence. The predicted polypeptide is 46% identical to EPB41 across 670 amino acids. By SDS-PAGE, the in vitro transcribed/translated product of the cDNA had a molecular mass of greater than 100 kD. RT-PCR detected EPB41L1 expression in several human tissues.


Mapping

By radiation hybrid mapping and somatic cell hybrid analysis, Kim et al. (1998) localized the EPB41L1 gene to 20q11.2-q12.


Molecular Genetics

In a 6-year-old boy with intellectual developmental disorder-11 (MRD11; see 614257), Hamdan et al. (2011) identified a de novo heterozygous missense mutation (P85S; 602879.0001) in the EPB41L1 gene, which is located within the critical region for chromosome 20q11-q12 deletion syndrome.


ALLELIC VARIANTS ( 1 Selected Example):

.0001 INTELLECTUAL DEVELOPMENTAL DISORDER, AUTOSOMAL DOMINANT 11 (1 patient)

EPB41L1, PRO854SER
  
RCV000023216

In a 6-year-old by with severely impaired intellectual development (MRD11; see 614257), Hamdan et al. (2011) identified a heterozygous c.2560C-T transition in the EPB41L1 gene (c.2560C-T, NM_012156.2) that resulted in a pro854-to-ser (P854S) substitution. The patient had hypotonia, no evidence of epilepsy, and normal brain imaging by MRI. 4.1N is a neuronal cytoskeletal protein, which binds to AMPA receptor subunits through its C-terminal domain and regulates their expression at the synaptic membrane (Lin et al., 2009, Shen et al., 2000). Hamdan et al. (2011) showed that substitution of proline for serine at position 854 results in a 50% reduction of binding of 4.1N to GLUR1 (138248) compared to wildtype.


REFERENCES

  1. Hamdan, F. F., Gauthier, J., Araki, Y., Lin, D.-T., Yoshizawa, Y., Higashi, K., Park, A.-R., Spiegelman, D., Dobrzeniecka, S., Piton, A., Tomitori, H., Daoud, H., and 22 others. Excess of de novo deleterious mutations in genes associated with glutamatergic systems in nonsyndromic intellectual disability. Am. J. Hum. Genet. 88: 306-316, 2011. Note: Erratum: Am. J. Hum. Genet. 88: 516 only, 2011. [PubMed: 21376300, images, related citations] [Full Text]

  2. Kim, A. C., Van Huffel, C., Lutchman, M., Chishti, A. H. Radiation hybrid mapping of EPB41L1, a novel protein 4.1 homologue, to human chromosome 20q11.2-q12. Genomics 49: 165-166, 1998. [PubMed: 9570967, related citations] [Full Text]

  3. Lin, D.-T., Makino, Y., Sharma, K., Hayashi, T., Neve, R., Takamiya, K., Huganir, R. L. Regulation of AMPA receptor extrasynaptic insertion by 4.1N, phosphorylation and palmitoylation. Nature Neurosci. 12: 879-887, 2009. [PubMed: 19503082, images, related citations] [Full Text]

  4. Nagase, T., Ishikawa, K., Nakajima, D., Ohira, M., Seki, N., Miyajima, N., Tanaka, A., Kotani, H., Nomura, N., Ohara, O. Prediction of the coding sequences of unidentified human genes. VII. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro. DNA Res. 4: 141-150, 1997. [PubMed: 9205841, related citations] [Full Text]

  5. Shen, L., Liang, F., Walensky, L. D., Huganir, R. L. Regulation of AMPA receptor GluR1 subunit surface expression by 4.1N-linked actin cytoskeletal association. J. Neurosci. 20: 7932-7940, 2000. [PubMed: 11050113, related citations] [Full Text]


Cassandra L. Kniffin - updated : 06/10/2021
Ada Hamosh - updated : 9/23/2011
Creation Date:
Patti M. Sherman : 7/23/1998
carol : 06/10/2021
carol : 03/29/2021
carol : 02/16/2019
carol : 03/05/2014
terry : 7/6/2012
terry : 10/10/2011
alopez : 10/3/2011
terry : 9/23/2011
carol : 1/16/2008
mgross : 3/10/2003
alopez : 7/28/1998
alopez : 7/28/1998

* 602879

ERYTHROCYTE MEMBRANE PROTEIN BAND 4.1-LIKE 1; EPB41L1


Alternative titles; symbols

NONERYTHROID PROTEIN 4.1, NEURON TYPE; 4.1N


HGNC Approved Gene Symbol: EPB41L1

Cytogenetic location: 20q11.23     Genomic coordinates (GRCh38): 20:36,091,414-36,232,799 (from NCBI)


Gene-Phenotype Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
20q11.23 ?Intellectual developmental disorder, autosomal dominant 11 614257 Autosomal dominant 3

TEXT

Cloning and Expression

Erythrocyte membrane protein band 4.1 (EPB41; 130500) is a multifunctional protein that mediates interactions between the erythrocyte cytoskeleton and the overlying plasma membrane. By screening human brain cDNAs for the potential to encode proteins larger than 100 kD, Nagase et al. (1997) identified a partial EPB41L1 cDNA. The 6,263-bp cDNA contains an open reading frame encoding 934 amino acids; it may lack 5-prime coding sequence. The predicted polypeptide is 46% identical to EPB41 across 670 amino acids. By SDS-PAGE, the in vitro transcribed/translated product of the cDNA had a molecular mass of greater than 100 kD. RT-PCR detected EPB41L1 expression in several human tissues.


Mapping

By radiation hybrid mapping and somatic cell hybrid analysis, Kim et al. (1998) localized the EPB41L1 gene to 20q11.2-q12.


Molecular Genetics

In a 6-year-old boy with intellectual developmental disorder-11 (MRD11; see 614257), Hamdan et al. (2011) identified a de novo heterozygous missense mutation (P85S; 602879.0001) in the EPB41L1 gene, which is located within the critical region for chromosome 20q11-q12 deletion syndrome.


ALLELIC VARIANTS 1 Selected Example):

.0001   INTELLECTUAL DEVELOPMENTAL DISORDER, AUTOSOMAL DOMINANT 11 (1 patient)

EPB41L1, PRO854SER
SNP: rs1569376434, ClinVar: RCV000023216

In a 6-year-old by with severely impaired intellectual development (MRD11; see 614257), Hamdan et al. (2011) identified a heterozygous c.2560C-T transition in the EPB41L1 gene (c.2560C-T, NM_012156.2) that resulted in a pro854-to-ser (P854S) substitution. The patient had hypotonia, no evidence of epilepsy, and normal brain imaging by MRI. 4.1N is a neuronal cytoskeletal protein, which binds to AMPA receptor subunits through its C-terminal domain and regulates their expression at the synaptic membrane (Lin et al., 2009, Shen et al., 2000). Hamdan et al. (2011) showed that substitution of proline for serine at position 854 results in a 50% reduction of binding of 4.1N to GLUR1 (138248) compared to wildtype.


REFERENCES

  1. Hamdan, F. F., Gauthier, J., Araki, Y., Lin, D.-T., Yoshizawa, Y., Higashi, K., Park, A.-R., Spiegelman, D., Dobrzeniecka, S., Piton, A., Tomitori, H., Daoud, H., and 22 others. Excess of de novo deleterious mutations in genes associated with glutamatergic systems in nonsyndromic intellectual disability. Am. J. Hum. Genet. 88: 306-316, 2011. Note: Erratum: Am. J. Hum. Genet. 88: 516 only, 2011. [PubMed: 21376300] [Full Text: https://doi.org/10.1016/j.ajhg.2011.02.001]

  2. Kim, A. C., Van Huffel, C., Lutchman, M., Chishti, A. H. Radiation hybrid mapping of EPB41L1, a novel protein 4.1 homologue, to human chromosome 20q11.2-q12. Genomics 49: 165-166, 1998. [PubMed: 9570967] [Full Text: https://doi.org/10.1006/geno.1998.5212]

  3. Lin, D.-T., Makino, Y., Sharma, K., Hayashi, T., Neve, R., Takamiya, K., Huganir, R. L. Regulation of AMPA receptor extrasynaptic insertion by 4.1N, phosphorylation and palmitoylation. Nature Neurosci. 12: 879-887, 2009. [PubMed: 19503082] [Full Text: https://doi.org/10.1038/nn.2351]

  4. Nagase, T., Ishikawa, K., Nakajima, D., Ohira, M., Seki, N., Miyajima, N., Tanaka, A., Kotani, H., Nomura, N., Ohara, O. Prediction of the coding sequences of unidentified human genes. VII. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro. DNA Res. 4: 141-150, 1997. [PubMed: 9205841] [Full Text: https://doi.org/10.1093/dnares/4.2.141]

  5. Shen, L., Liang, F., Walensky, L. D., Huganir, R. L. Regulation of AMPA receptor GluR1 subunit surface expression by 4.1N-linked actin cytoskeletal association. J. Neurosci. 20: 7932-7940, 2000. [PubMed: 11050113] [Full Text: https://doi.org/10.1523/JNEUROSCI.20-21-07932.2000]


Contributors:
Cassandra L. Kniffin - updated : 06/10/2021
Ada Hamosh - updated : 9/23/2011

Creation Date:
Patti M. Sherman : 7/23/1998

Edit History:
carol : 06/10/2021
carol : 03/29/2021
carol : 02/16/2019
carol : 03/05/2014
terry : 7/6/2012
terry : 10/10/2011
alopez : 10/3/2011
terry : 9/23/2011
carol : 1/16/2008
mgross : 3/10/2003
alopez : 7/28/1998
alopez : 7/28/1998